Debashis Sahoo, PhD

Assistant Professor
Department of Pediatrics
Department of Computer Science and Engineering
University of California San Diego
9500 Gilman Drive, MC 0984
Biomedical Research Facility II, Room 2119
La Jolla, CA 92093-0984
Phone: 858-246-1803
Fax: 858-246-0019
7910 Frost Street, Suite 300
Room 371
San Diego, CA 92123
Phone: 858-246-1803
Fax: 858-246-0019

Instructor of Pathology and Siebel Fellow at
Institute of Stem Cell Biology and Regenerative Medicine
Stanford University, Stanford, CA 94305-5461

Ph.D. 2008, M.S. 2003 BTech 2000
Department of Electrical Engineering
Stanford University
Stanford, CA 94305 (USA)
Department of Computer Science and Engineering
Indian Institute of Technology
Kharagpur-721302, (India)

Ph.D. Thesis: Boolean analysis of high-throughput biological datasets
Ph.D. University/Date: Stanford University, September 25, 2008
Ph.D. Advisor: David L. Dill, Co-advisor: Sylvia K. Plevritis

List of publications

My research is on developing new methods to analyze high-throughput biological datasets. I have developed several tools and techniques to analyze large collections of microarray datasets. I have made specific biological predictions and then validated them in collaborations with several biologists at Stanford. Some of my tools that analyze gene expression datasets are StepMiner, BooleanNet and MiDReG .
Teaching (Stanford):
  • StemRem 201 - Fall 2013
  • StemRem 201 - Fall 2012
  • Teaching (UCSD):
  • CSE100: Advanced Data Structures (Spring 2015)
  • CSE100: Advanced Data Structures (Fall 2015)
  • CSE100: Advanced Data Structures (Fall 2016)

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