Correcting Base-assignment Errors in Repeat Regions of Shotgun Assembly


Degui Zhi, Uri Keich, Pavel Pevzner, Steffen Heber, Haixu Tang

Additional results
The euler_air software

Software Downloads

euler_air.tar.gz [205k]

Additional third party software required by EULER-AIR:

ReAligner (ftp://ftp.cs.arizona.edu/realigner) -- A modified version of ReAligner is included in the above euler_air distribution.
MUMMER 3.0 + (http://www.tigr.org/software/mummer/)
BLAST (http://www.ncbi.nlm.nih.gov/BLAST/)

Instructions

Instructions on installation and running procedure are included in the package but are also available here.